Windows system

If you are on a Windows system, SPAdes does not work correctly in Linux. Instead, you will need to use Galaxy to upload your sequences for assembly. For this assignment, please submit a screenshot of your uploaded files. These should be the files you downloaded from the Module 6 link.

https://usegalaxy.org (Links to an external site.). On the left hand side, you will see lots of options. Scroll down to Genomics Analysis and select Assembly. You can then choose SPAdes. Before proceeding, you will need to sign up for an account. It is free. The website is fairly self explanatory, but here is a video showing how to upload your reads to the website: Link to Video (Links to an external site.)

https://www.youtube.com/watch?v=5i-gM2QgLoY&feature=youtu.be

http://quast.sourceforge.net/docs/manual.html (Quast manual)

https://drive.google.com/file/d/1TjLVt5RxXlBLummon2jRjR7YNFNBGhmE/view?usp=sharing (share drive that my prof want me to use for Genome assembly)

https://we.tl/t-TnLqrth2Yp?src=dnl

Unlock Your Academic Potential with Our Expert Writers

Embark on a journey of academic success with Legit Writing. Trust us with your first paper and experience the difference of working with world-class writers. Spend less time on essays and more time achieving your goals.

Order Now